Long story short - I have fitted a Focus engine into a Ka but cannot get it to run. I assume there is a problem with the ECUs matching up and PATS preventing the car from starting.

I have the ECU printouts from both vehicles.

The PATS pins for the Ka are: #5, 38, 39, 32 and 41.

Would it run if I removed these pins completely or do they need to be plugged in somewhere?